Details of Duplex


2D Structure dot-bracket from RNAduplex"
ATAGGACTCATATAGTGCCAG&TTGGCTGGATGGGTCTTATC
(((((((((((.....(((((&)))))...))))))))))).
Details
MiRNAhsa-miR-3117-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site415,435
Score0.923
Seed1
Au0.588
Energy-18.1
Binding len20
Me-10.399
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure