Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGTGGACAGTGAGGTAGAGGGAGT&GCAAAAATTCCTGATCCTTCTGCCGTCAAACCAGAA
(.(((....(((((((((((((..&.)))))))))).)))..))).).
Details
MiRNAhsa-miR-3138
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1048,1084
Score0.923
Seed0
Au0.544
Energy-22.0
Binding len23
Me-11.916
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings12
Pairings in 3prime end6
PositionCDS
2D Structure