Details of Duplex


2D Structure dot-bracket from RNAduplex"
GAGGGCGGGTGGAGGAGGA&TCCTGATCCTTCTGCCGTCA
((.((((((.(((..((((&))))..))).)))))).)).
Details
MiRNAhsa-miR-3141
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1056,1076
Score0.923
Seed0
Au0.544
Energy-23.7
Binding len20
Me-8.33
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings4
Pairings in 3prime end6
PositionCDS
2D Structure