Details of Duplex


2D Structure dot-bracket from RNAduplex"
AAGGCCTTTCTGAACCTTCAGA&GAAGGTTGGCTGGATGGGTCTTA
(((((((.(((((((((((...&)))))))...)))).))))))).
Details
MiRNAhsa-miR-3142
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site410,433
Score1.0
Seed1
Au0.603
Energy-20.4
Binding len23
Me-6.251
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings16
Pairings in 3prime end5
PositionCDS
2D Structure