Details of Duplex


2D Structure dot-bracket from RNAduplex"
CAGAAGGGGAGTTGGGAGCAGA&TTCCTGATCCTTCTGC
(((((((...((((((((....&))))))))))))))).
Details
MiRNAhsa-miR-3154
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1055,1071
Score0.846
Seed1
Au0.544
Energy-16.3
Binding len16
Me-8.55
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure