Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTCAGCCAGGCTAGTGCAGTCT&AGTCGCTGCTGCGCGGCCGCCGGCGGGACTGGTCTGAAG
((((((((((((.(((((((..&.)))))))))))...........))).))))).
Details
MiRNAhsa-miR-3157-5p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site3,42
Score0.846
Seed1
Au0.309
Energy-23.6
Binding len33
Me-5.227
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings21
Pairings in 3prime end6
Position5UTR
2D Structure