Details of Duplex


2D Structure dot-bracket from RNAduplex"
CTGCCCTAGTCTAGCTGAAGCT&AGCTCAGGACTGGGAGAGA
((..(((((((...(((.((((&))))))))))))))..)).
Details
MiRNAhsa-miR-3157-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site173,192
Score0.923
Seed0
Au0.603
Energy-18.6
Binding len19
Me-14.02
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings14
Position of longest consecutive pairings5
Pairings in 3prime end7
Position5UTR
2D Structure