Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGGTGGATGCAATGTGACCTCA&TGAGCTGTCACTGCCGAAAACAGGCCGCAAGAGAGCATCTGCCC
.(((((((((..((((.(((..&.))).)))).....))))))))).
Details
MiRNAhsa-miR-3165
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site77,121
Score0.923
Seed1
Au0.456
Energy-19.9
Binding len24
Me-9.965
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure