Details of Duplex


2D Structure dot-bracket from RNAduplex"
CGGGGAGAGAACGCAGTGACGT&GCAACGACTTGGACATCTGAGCTGTCACTGCCGAAAACAGGCCGCAAGAGAGCATCTGCCCA
.(((.(((....(((((((((.&.))))))))).......................))).))).
Details
MiRNAhsa-miR-3175
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site60,122
Score0.923
Seed0
Au0.456
Energy-21.8
Binding len41
Me-16.383
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings31
Pairings in 3prime end7
Position5UTR
2D Structure