Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGGGGCGGAGCTTCCGGAGGCC&GCCGAAAACAGGCCGCAAGAGAGCATCTGCCCA
..((((((((((((..(.((((&.)))).)..)).))).))))))).
Details
MiRNAhsa-miR-3180-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site89,122
Score0.846
Seed1
Au0.456
Energy-26.6
Binding len24
Me-5.925
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure