Details of Duplex


2D Structure dot-bracket from RNAduplex"
CCTGGGCAGCGTGTGGCTGAAGG&CCTTCTGCCGTCAAACCAGAAGACTGGGATGAAAGTGAACCTGCCCAA
..(((((((..((((((.(((((&))))).)))).))...........................))))))).
Details
MiRNAhsa-miR-3187-5p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1063,1111
Score0.923
Seed1
Au0.574
Energy-23.3
Binding len48
Me-9.024
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure