Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGAGGCTTTGTGCGGATACGGGG&TTGTAAACAAAGGAAGCCTCC
.((((((((.(..(..(((((..&)))))..)..).)))))))).
Details
MiRNAhsa-miR-3188
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site944,965
Score0.846
Seed1
Au0.588
Energy-17.4
Binding len21
Me-10.64
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure