Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGCCCCATCTGTGCCCTGGGTAGGA&TCTGTTCGGAAAAGGAAGTAGCAGATCACTGGGCTGCAGATGGTTGGA
..((((((((((((((.((((....&.))).).)))).))))))))..)).
Details
MiRNAhsa-miR-3189-5p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1490,1538
Score0.923
Seed1
Au0.603
Energy-23.5
Binding len25
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings5
Pairings in 3prime end4
PositionCDS
2D Structure