Details of Duplex


2D Structure dot-bracket from RNAduplex"
TCCTGCGTAGGATCTGAGGAGT&GCACCTCAGATTCTTAATCCAGCATGTCGGAT
(((.(((((((((((((((.((&)).))))))))))).........)))).))).
Details
MiRNAhsa-miR-3193
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1231,1263
Score0.846
Seed0
Au0.485
Energy-21.5
Binding len32
Me-6.97
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings18
Pairings in 3prime end7
PositionCDS
2D Structure