Details of Duplex


2D Structure dot-bracket from RNAduplex"
GTGGAGTCCTGGGGAATGGAGA&CCAAAGCTCAGGACTG
....(((((((((...(((...&)))...))))))))).
Details
MiRNAhsa-miR-3198
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site169,185
Score0.846
Seed0
Au0.603
Energy-19.2
Binding len16
Me-11.372
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end3
Position5UTR
2D Structure