Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACTGGACTTGGAGTCAGAAGAGTGG&CCAGATTATTTCGAAGATGATCATCCATTTCTTCTGACTTCTTTCAGTG
((((((...((((((((((((((((&.))))).))))))))))).)))))).
Details
MiRNAhsa-miR-378c
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1384,1433
Score0.846
Seed0
Au0.588
Energy-27.5
Binding len26
Me-8.851
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings8
Pairings in 3prime end8
PositionCDS
2D Structure