Details of Duplex


2D Structure dot-bracket from RNAduplex"
GAGTGTAGTTCTGAGCAGAGC&GCTTGGGAGTTAAAAGCAAATGGCAACCAAAGCTCAGGACTGGGA
...(.(((((((((((.....&.))))))))))).).
Details
MiRNAhsa-miR-4280
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site143,188
Score0.923
Seed0
Au0.618
Energy-18.6
Binding len15
Me-10.634
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings3
Pairings in 3prime end3
Position5UTR
2D Structure