Details of Duplex


2D Structure dot-bracket from RNAduplex"
GCACCCAGGCAAGGATTCTG&CAGGATCTGGAGATGGGC
...((((.....((((((((&)))))))).....)))).
Details
MiRNAhsa-miR-500b-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1979,1997
Score0.846
Seed0
Au0.544
Energy-16.4
Binding len18
Me-17.299
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end8
PositionCDS
2D Structure