Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGTGATATCATGGTTCCTGGGA&CCGGCGGGACTGGTCTGAAGAGACGCGGGGACCAAGTGGCAACGACTTGGACATCTGAGCTGTCACT
.((((((((((((((((((.(.&.).))))))))).....................)))..)))))).
Details
MiRNAhsa-miR-3689a-5p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site22,89
Score0.872
Seed1
Au0.441
Energy-20.7
Binding len45
Me-3.793
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings33
Pairings in 3prime end6
Position5UTR
2D Structure