Details of Duplex


2D Structure dot-bracket from RNAduplex"
CTGGGAGGTGTGATATCGTGGT&GCCGCAAGAGAGCATCTGCCCAA
.((((((((((..(...(((((&)))))...)..)))))).)))).
Details
MiRNAhsa-miR-3689a-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site100,123
Score0.923
Seed1
Au0.456
Energy-20.4
Binding len23
Me-9.398
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings6
Pairings in 3prime end5
Position5UTR
2D Structure