Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGGTGCTCCAGGCTGGCTCACA&TGAGAGCACAGGATCTGGAGATGGGCCG
.(((.((((((((((((((.((&)).)))).)))..))))))...).))).
Details
MiRNAhsa-miR-3907
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1971,1999
Score0.923
Seed0
Au0.529
Energy-21.2
Binding len28
Me-7.912
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings9
Pairings in 3prime end7
PositionCDS
2D Structure