Details of Duplex


2D Structure dot-bracket from RNAduplex"
CTGGGAGGTGTGATATTGTGGT&GCCGCAAGAGAGCATCTGCCCAA
.((((((((((....(((((((&)))))))....)))))).)))).
Details
MiRNAhsa-miR-3689b-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site100,123
Score0.846
Seed1
Au0.456
Energy-23.8
Binding len23
Me-10.022
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings16
Pairings in 3prime end7
Position5UTR
2D Structure