Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGTCCTCTAGGGCCTGCAGTCT&AGAAAGCAGCCCTGGAAAAACCAATGGACC
.(((((((((((.((((..(((&)))..))))))))))).........)))).
Details
MiRNAhsa-miR-3909
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1781,1811
Score0.846
Seed1
Au0.588
Energy-23.3
Binding len30
Me-5.082
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings14
Pairings in 3prime end6
PositionCDS
2D Structure