Details of Duplex


2D Structure dot-bracket from RNAduplex"
TCAGGTGTGGAAACTGAGGCAG&TGCCAGACCTGAACTTTAATCAGTCTGCACATCCTGT
.((((((((.(.(((((((((.&))))...............))))).).)))).)))).
Details
MiRNAhsa-miR-3934-5p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site2096,2133
Score0.846
Seed1
Au0.647
Energy-20.4
Binding len37
Me-8.383
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings5
Position of longest consecutive pairings13
Pairings in 3prime end7
Position3UTR
2D Structure