Details of Duplex


2D Structure dot-bracket from RNAduplex"
AATTCCCTTGTAGATAACCCGG&GGTGTTTGCTTGGGAGTTA
(((((((..((((((.(((...&)))))))))..))))))).
Details
MiRNAhsa-miR-3938
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site136,155
Score0.846
Seed1
Au0.529
Energy-18.7
Binding len19
Me-7.541
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings10
Pairings in 3prime end4
Position5UTR
2D Structure