Details of Duplex


2D Structure dot-bracket from RNAduplex"
GTGGGTTGGGGCGGGCTCTG&GGAGTCCTCGAAAAATTCCTAATCCAG
.((((((((((.(((((((.&))))))).)........))))))))).
Details
MiRNAhsa-miR-3940-5p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1361,1388
Score0.846
Seed1
Au0.632
Energy-21.2
Binding len27
Me-7.14
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure