Details of Duplex


2D Structure dot-bracket from RNAduplex"
GTGGGTTGGGGCGGGCTCTG&AGAGCATCTGCCCAAGCAACA
((..(((.(((((((((((.&)))))..)))))).))).)).
Details
MiRNAhsa-miR-3940-5p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site108,129
Score1.0
Seed0
Au0.5
Energy-20.7
Binding len21
Me-10.841
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings8
Pairings in 3prime end7
Position5UTR
2D Structure