Details of Duplex


2D Structure dot-bracket from RNAduplex"
CAGCCCGGATCCCAGCCCACTT&GGCGGGACTGGTCTGA
(((.((((.((((.(((.....&))))))))))).))).
Details
MiRNAhsa-miR-3940-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site24,40
Score0.923
Seed0
Au0.309
Energy-21.0
Binding len16
Me-8.883
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings5
Pairings in 3prime end3
Position5UTR
2D Structure