Details of Duplex


2D Structure dot-bracket from RNAduplex"
CAGCCCGGATCCCAGCCCACTT&TGGGCTGCAGATGGTTGG
(((((...(((.(((((((...&)))))))..)))))))).
Details
MiRNAhsa-miR-3940-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1519,1537
Score0.923
Seed0
Au0.588
Energy-19.5
Binding len18
Me-13.043
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure