Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGGGCATAGGAGAGGGTTGATAT&CAAGCCTTTTGGCTATGTTTG
.((((((((((((((.(((....&))).))))))..)))))))).
Details
MiRNAhsa-miR-3945
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site214,235
Score0.846
Seed1
Au0.647
Energy-16.8
Binding len21
Me-4.026
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure