Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGGGCATAGGAGAGGGTTGATAT&CCTGATCCTTCTGCCG
..((((.((((..(((.......&)))..))))..)))).
Details
MiRNAhsa-miR-3945
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1057,1073
Score0.846
Seed0
Au0.574
Energy-16.9
Binding len16
Me-11.137
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings4
Position of longest consecutive pairings7
Pairings in 3prime end1
PositionCDS
2D Structure