Details of Duplex


2D Structure dot-bracket from RNAduplex"
CAAGGAGACGGGAACATGGAGC&GCCTTTTGGCTATGTTTGGGTCTTCTG
..(((((((..((((((((...&.))))))))..))))))).
Details
MiRNAhsa-miR-4428
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site217,244
Score0.846
Seed1
Au0.632
Energy-18.3
Binding len19
Me-9.024
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end5
PositionCDS
2D Structure