Details of Duplex


2D Structure dot-bracket from RNAduplex"
GCAGGACAGGCAGAAGTGGAT&ATCCTTCTGCCGTCAAACCAGAAGACTGGGATGAAAGTGAACCTGCC
(((((((.(((((((..((((&)))))))))))))............................))))).
Details
MiRNAhsa-miR-4436a
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1061,1108
Score0.846
Seed1
Au0.559
Energy-19.1
Binding len47
Me-6.484
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings34
Pairings in 3prime end6
PositionCDS
2D Structure