Details of Duplex


2D Structure dot-bracket from RNAduplex"
GCAGGACAGGCAGAAGTGGAT&ATCCATTTCTTCTGACTTCTTTCAGTGCTCTTGG
.(((((((((.((((((((((&))))))))))))))..............))))).
Details
MiRNAhsa-miR-4436a
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1406,1440
Score0.846
Seed1
Au0.603
Energy-17.7
Binding len34
Me-6.618
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings14
Position of longest consecutive pairings20
Pairings in 3prime end8
PositionCDS
2D Structure