Details of Duplex


2D Structure dot-bracket from RNAduplex"
CAGGGCTGGCAGTGACATGGGT&ACCAAGTGGCAACGACTTGGACATCTGAGCTGTCACTGCCGAAAACAGGCCGCAAGAGAGCATCTGCCCA
..(((((((((((((((.....&.)))))))))))........................)))).
Details
MiRNAhsa-miR-4446-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site52,122
Score0.923
Seed1
Au0.456
Energy-24.7
Binding len41
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings29
Pairings in 3prime end3
Position5UTR
2D Structure