Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGAGGTAGGTGTGGAAGAA&TTCTATCAACAATTGAAAGTGTTGTATATGACCCACATTTACCTA
..((((((((((((.....&.)))))))))))).
Details
MiRNAhsa-miR-4458
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site2494,2539
Score0.923
Seed1
Au0.676
Energy-19.1
Binding len14
Me-5.925
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure