Details of Duplex


2D Structure dot-bracket from RNAduplex"
GGGAGGTGTGATCTCACACTCG&TGGGTGTGGTGAGTGGAAACCTCCCA
(((((((....(((((((((((&))))))))).))......))))))).
Details
MiRNAhsa-miR-3689d
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1263,1289
Score0.923
Seed1
Au0.544
Energy-26.4
Binding len26
Me-11.375
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings17
Pairings in 3prime end8
PositionCDS
2D Structure