Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTAGTCCTGCCTGTAGGTTTA&TAAACCTGCTGGCTGGCTTGAT
((((.((.(((.(((((((((&))))))))).))).)).)))).
Details
MiRNAhsa-miR-4540
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1131,1153
Score1.0
Seed0
Au0.603
Energy-20.6
Binding len22
Me-13.717
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings13
Pairings in 3prime end8
PositionCDS
2D Structure