Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACTGGGAAGAGGAGCTGAGGGA&CCTCCTAGAGGATGTGGTTCCTCCTATCAAACCTCCCAA
..(((((.((((((((((((..&))))...........))))))))..........))))).
Details
MiRNAhsa-miR-4646-5p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site960,999
Score0.846
Seed0
Au0.588
Energy-20.2
Binding len39
Me-7.271
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings16
Pairings in 3prime end6
PositionCDS
2D Structure