Details of Duplex


2D Structure dot-bracket from RNAduplex"
CCCAGGGCTTGGAGTGGGGCAAGGTT&GGCCGCAAGAGAGCATCTGCCCAAGCAACAAAGAGGAGGTGTTTGCTTGGGA
((((((((((((.(((((((......&.)).)))))))))))...................)))))).
Details
MiRNAhsa-miR-4685-5p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site99,151
Score0.923
Seed1
Au0.529
Energy-23.1
Binding len41
Me-5.227
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings26
Pairings in 3prime end2
Position5UTR
2D Structure