Details of Duplex


2D Structure dot-bracket from RNAduplex"
TCAGATGATCTAAAGGCCTATA&AGGCCGCAAGAGAGCATCTGC
.((((((.(((...(((((...&))))).....))).)))))).
Details
MiRNAhsa-miR-1245b-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site98,119
Score0.808
Seed1
Au0.456
Energy-19.4
Binding len21
Me-11.6
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure