Details of Duplex


2D Structure dot-bracket from RNAduplex"
TCAGATGATCTAAAGGCCTATA&TGGGTCTTCTGTTCATCTC
..((((((.(..((((((((..&))))))))..).)))))).
Details
MiRNAhsa-miR-1245b-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site233,252
Score0.846
Seed1
Au0.618
Energy-18.1
Binding len19
Me-12.185
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end6
PositionCDS
2D Structure