Details of Duplex


2D Structure dot-bracket from RNAduplex"
CATCCGTCCGTCTGTCCAC&GTGGAAGGTTGGCTGGATGGGTC
.(((((((((((..(((((&))))).....))).)))))))).
Details
MiRNAhsa-miR-4800-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site407,430
Score1.0
Seed1
Au0.588
Energy-20.1
Binding len23
Me-5.939
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure