Details of Duplex


2D Structure dot-bracket from RNAduplex"
CATCCGTCCGTCTGTCCAC&TGGGCTGCAGATGGTTGGAG
..((((.(((((((((((.&)))...)))))))).)))).
Details
MiRNAhsa-miR-4800-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1519,1539
Score0.923
Seed0
Au0.603
Energy-18.7
Binding len20
Me-6.501
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings6
Pairings in 3prime end7
PositionCDS
2D Structure