Details of Duplex


2D Structure dot-bracket from RNAduplex"
CAGTTCAGAAGTGTTCCTGAGT&ACTGGTCTGAAGAGACGCGGGGACCAAGTGGCAACGACTTGGACATCTGAGCTGT
(((((((((.(((((((((.((&.)).)))))))..................)).))))))))).
Details
MiRNAhsa-miR-5000-5p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site30,85
Score0.846
Seed1
Au0.412
Energy-21.8
Binding len42
Me-5.18
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
Position5UTR
2D Structure