Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGGGCTGGACTCAGCGGCGGAGCT&GGCAGCTGCTGAAGGGCACCCA
.(((.((..(((((((((...(((&))).)))))))).)..))))).
Details
MiRNAhsa-miR-5001-5p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1593,1615
Score0.923
Seed0
Au0.559
Energy-23.3
Binding len22
Me-11.282
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end5
PositionCDS
2D Structure