Details of Duplex


2D Structure dot-bracket from RNAduplex"
TCACAACAACCTTGCAGGGTAGA&TTCTGTATGGTTGTTTGAT
(((.(((((((.(((((((....&))))))).)))))))))).
Details
MiRNAhsa-miR-5003-5p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site2476,2495
Score0.846
Seed0
Au0.706
Energy-18.2
Binding len19
Me-10.316
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure