Details of Duplex


2D Structure dot-bracket from RNAduplex"
TACTTTTCTAGGTTGTTGGGG&CCCTGGAAAAACCAATGGACCTGGAAGAGG
..((((((((((((.((((..&.))))..)))))))))))).
Details
MiRNAhsa-miR-5003-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1790,1820
Score0.923
Seed1
Au0.588
Energy-22.1
Binding len20
Me-5.692
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure