Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGAGGACAGGGCAAATTCACGA&GGACATGCCTTGTTCA
...((((((((((..(((....&)))..)))))))))).
Details
MiRNAhsa-miR-5004-5p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site2596,2612
Score0.846
Seed0
Au0.691
Energy-18.0
Binding len16
Me-8.107
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure