Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCCAGGGCAGGAGGTGGAA&TTCCTGATCCTTCTGCCGTCAAACCAGAAGACTGGGAT
.(.(((((((((((((.((((&))))....)))))))))..............)))).).
Details
MiRNAhsa-miR-5006-5p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1055,1093
Score0.846
Seed0
Au0.544
Energy-21.2
Binding len38
Me-5.351
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings21
Pairings in 3prime end7
PositionCDS
2D Structure